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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922638.1_cds_XP_016471421.1_63765
CDS Infomation

[gene=LOC107793557] [db_xref=GeneID:107793557] [protein=probable 2-oxoglutarate-dependent dioxygenase At3g49630] [protein_id=XP_016471421.1] [location=join(67050..67146,67406..67521,67790..67893,67973..68036,69023..69090,69275..69362)] [gbkey=CDS]
Sequence

ATGAATTGTTATCAGTGGTTATCCATTTTGGGTTTTGTAAACAATTGGTTTACCTTGCTC
CATCCATCTCAGATGGGCATAACAATGTTGTTGGATGATATAAGTCCTCTTTTGGACAAG
TCGGATCATCCAAATATGGCTCAAGATGAACGTGCTGCTCAAGTTGTTAGGGAATTAGAT
CTGGCTTGTAGAGAAGCTGGATTCTTTTACGTGACAGGCCATGGTATTCCTCAGATTAGA
AGCATTAAACATGAATATTTTCATCAACCTTATGAGGATAAACTCAAGATCAAACTTTCT
GCCGAAACTGGATACAGAGGATATCAAAGAATTGGAGAGAATATAACCAAAGGCACACCT
GATATGCATGAAGCAATTGATTGCTATAGAGAAGTTAAACATAGGATGTATGGAGATCTT
GGAGAAGTTATGCAAGGATCCAACATACGGTCAAGTAGCCCTCCAAATTTCAAGCAGTTA
GTGGAGGAGTATGTTGACCATTGCACAGTTGCCTTGCTCTATTGCATACTCTTTTGA

Peptide Sequence

PEP ID

XP_016471421.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 [Nicotiana tabacum]
Sequence

MNCYQWLSILGFVNNWFTLLHPSQMGITMLLDDISPLLDKSDHPNMAQDERAAQVVRELD
LACREAGFFYVTGHGIPQIRSIKHEYFHQPYEDKLKIKLSAETGYRGYQRIGENITKGTP
DMHEAIDCYREVKHRMYGDLGEVMQGSNIRSSSPPNFKQLVEEYVDHCTVALLYCILF

Transcript Sequence

Gene sequence data has not been registered.